ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4i53A1 - ECOD Domain | ECOD

ECOD/Domains/e4i53A1

e4i53A1

UID: 002528723

PDB

Range: A:49-255,A:474-491
PDB: 4I53 chain A(all domains)
UniProt: C6G099 (all domains)
Gene: env

Molecule: HIV-1 glycoprotein

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupgp120 inner domain(1061)

HH-groupgp120 inner domain(1061.1)

TT-groupgp120 inner domain(1061.1.1)

FFamilyGP120(1061.1.1.1)

Ligands

in contact, ≤ 4 Å

amino({[(1R,2R)-1-({[(4-chloro-3-fluorophenyl)amino](oxo)acetyl}amino)-2,3-dihydro-1H-inden-2-yl]methyl}amino)methaniminium1C1
2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 4I53 RCSB PDB: 4I53 PDBe: 4I53 UniProt: C6G099

Downloads

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