ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rg1B2 - ECOD Domain | ECOD

ECOD/Domains/e4rg1B2

e4rg1B2

UID: 002529532

PDB

Range: B:178-273
PDB: 4RG1 chain B(all domains)
UniProt: Q5T280 (all domains)
Gene: SPOUT1

Molecule: C9orf114

3D Structure

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Related Domains

Browse other domains in Methyltrn_RNA_3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyMethyltrn_RNA_3(2.1.1.21)

Ligands

in contact, ≤ 4 Å

POLYETHYLENE GLYCOL (N=34)15P

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02598Methyltrn_RNA_3

Putative RNA methyltransferase

ClanCL0098SPOUT

External Links

ECOD PDB View: 4RG1 RCSB PDB: 4RG1 PDBe: 4RG1 UniProt: Q5T280

Downloads

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