ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3tgsB1 - ECOD Domain | ECOD

ECOD/Domains/e3tgsB1

e3tgsB1

UID: 002529629

PDB

Range: B:44-255,B:474-492
PDB: 3TGS chain B(all domains)
UniProt: C6G099 (all domains)
Gene: env

Molecule: HIV-1 clade C1086 gp120 core

3D Structure

Loading viewer...

Related Domains

Browse other domains in GP120 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupgp120 inner domain(1061)

HH-groupgp120 inner domain(1061.1)

TT-groupgp120 inner domain(1061.1.1)

FFamilyGP120(1061.1.1.1)

Ligands

in contact, ≤ 4 Å

N-(4-chlorophenyl)-N'-(2,2,6,6-tetramethylpiperidin-4-yl)ethanediamide03G
2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 3TGS RCSB PDB: 3TGS PDBe: 3TGS UniProt: C6G099

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure