ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4v8yAC3 - ECOD Domain | ECOD

ECOD/Domains/e4v8yAC3

e4v8yAC3

UID: 002529815

PDB

Range: AC:109-175
PDB: 4V8Y chain AC(all domains)
UniProt: P25443 (all domains)
Gene: RPS2

Molecule: 40S RIBOSOMAL PROTEIN S2

3D Structure

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Related Domains

Browse other domains in Ribosomal_S5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupdsRNA-binding domain-like(330.1)

TT-groupdsRNA-binding domain-like(330.1.1)

FFamilyRibosomal_S5(330.1.1.2)

Ligands

in contact, ≤ 4 Å

osmium (III) hexammineOHX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00333Ribosomal_S5

Ribosomal protein S5, N-terminal domain

ClanCL0196DSRM

External Links

ECOD PDB View: 4V8Y RCSB PDB: 4V8Y PDBe: 4V8Y UniProt: P25443

Downloads

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