ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5bwdA1 - ECOD Domain | ECOD

ECOD/Domains/e5bwdA1

e5bwdA1

UID: 002530252

PDB

Range: A:6-733
PDB: 5BWD chain A(all domains)
UniProt: O68395 (all domains)
Gene: tutD

Molecule: benzylsuccinate synthase alpha chain

3D Structure

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Related Domains

Browse other domains in PFL-like →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTen stranded beta/alpha barrel(2500)

HH-groupTen stranded beta/alpha barrel(2500.1)

TT-groupTen stranded beta/alpha barrel(2500.1.1)

FFamilyPFL-like(2500.1.1.3)

Ligands

in contact, ≤ 4 Å

Fumaric acidFUM
drugDrugBank DB01677

+ 3 additives (Triethylene glycol, Tromethamine, Tetraethylene glycol)

Triethylene glycolPGE
DrugBank DB02327

Pfam Families

PF02901PFL-like

Pyruvate formate lyase-like

ClanCL0339PFL-like

External Links

ECOD PDB View: 5BWD RCSB PDB: 5BWD PDBe: 5BWD UniProt: O68395

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

TromethamineTRS

DrugBank DB03754

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.