ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4z4dA2 - ECOD Domain | ECOD

ECOD/Domains/e4z4dA2

e4z4dA2

UID: 002530313

PDB

Range: A:409-578,A:837-859
PDB: 4Z4D chain A(all domains)
UniProt: Q9UKV8 (all domains)
Gene: AGO2

Molecule: Protein argonaute-2

3D Structure

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Related Domains

Browse other domains in Piwi,ArgoMid →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMiddle domain in Argonaute homologs(7590)

HH-groupMiddle domain in Argonaute homologs(7590.1)

TT-groupMiddle domain in Argonaute homologs(7590.1.1)

FFamilyPiwi,ArgoMid(7590.1.1.3)

Ligands

in contact, ≤ 4 Å

PhenolIPH
drugDrugBank DB03255

+ 1 additive (Isopropyl alcohol)

Isopropyl alcoholIPA
DrugBank DB02325

Shown in the structure viewer.

Pfam Families

Piwi domain

ClanCL0219RNase_H

PF16487ArgoMid

Mid domain of argonaute

External Links

ECOD PDB View: 4Z4D RCSB PDB: 4Z4D PDBe: 4Z4D UniProt: Q9UKV8

Downloads

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Drug annotations from DrugDomain.