ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5k6kB1 - ECOD Domain | ECOD

ECOD/Domains/e5k6kB1

e5k6kB1

UID: 002530774

PDB

Range: B:-1-163
PDB: 5K6K chain B(all domains)
UniProt: Q32ZE1 (all domains)

Molecule: Zika virus protein

3D Structure

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Related Domains

Browse other domains in Flavi_NS1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavivirus non-structural protein 1 (NS1) a/b domain(3828)

HH-groupFlavivirus non-structural protein 1 (NS1) a/b domain(3828.1)

TT-groupFlavivirus non-structural protein 1 (NS1) a/b domain(3828.1.1)

FFamilyFlavi_NS1(3828.1.1.1)

Ligands

in contact, ≤ 4 Å

2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00948Flavi_NS1

Flavivirus non-structural Protein NS1

External Links

ECOD PDB View: 5K6K RCSB PDB: 5K6K PDBe: 5K6K UniProt: Q32ZE1

Downloads

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