ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5fayB1 - ECOD Domain | ECOD

ECOD/Domains/e5fayB1

e5fayB1

UID: 002530855

PDB

Range: B:67-724
PDB: 5FAY chain B(all domains)
UniProt: Q30W70 (all domains)
Gene: cutC

Molecule: Choline trimethylamine-lyase

3D Structure

Loading viewer...

Related Domains

Browse other domains in PFL-like →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTen stranded beta/alpha barrel(2500)

HH-groupTen stranded beta/alpha barrel(2500.1)

TT-groupTen stranded beta/alpha barrel(2500.1.1)

FFamilyPFL-like(2500.1.1.3)

Ligands

in contact, ≤ 4 Å

CholineCHT
drugDrugBank DB00122

+ 1 additive (Malonate ion)

Malonate ionMLI

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02901PFL-like

Pyruvate formate lyase-like

ClanCL0339PFL-like

External Links

ECOD PDB View: 5FAY RCSB PDB: 5FAY PDBe: 5FAY UniProt: Q30W70

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure