ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5urbA4 - ECOD Domain | ECOD

ECOD/Domains/e5urbA4

e5urbA4

UID: 002531086

PDB

Range: A:138-167
PDB: 5URB chain A(all domains)
UniProt: A0A0D5YKJ7 (all domains)
Gene: metG

Molecule: Methionine--tRNA ligase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1g →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilytRNA-synt_1g(375.1.1.46)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Nitrate ion)

Nitrate ionNO3

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09334tRNA-synt_1g

tRNA synthetases class I (M)

ClanCL0039HUP

External Links

ECOD PDB View: 5URB RCSB PDB: 5URB PDBe: 5URB UniProt: A0A0D5YKJ7

Downloads

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