ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5n0yA3 - ECOD Domain | ECOD

ECOD/Domains/e5n0yA3

e5n0yA3

UID: 002531212

PDB

Range: A:96-262
PDB: 5N0Y chain A(all domains)
UniProt: Q9UM07 (all domains)
Gene: PADI4

Molecule: Protein-arginine deiminase type-4

3D Structure

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Related Domains

Browse other domains in PAD_M →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCommon fold of diphtheria toxin/transcription factors/cytochrome f(11.1.5)

FFamilyPAD_M(11.1.5.30)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Protein-arginine deiminase (PAD) middle domain

ClanCL0073P53-like

External Links

ECOD PDB View: 5N0Y RCSB PDB: 5N0Y PDBe: 5N0Y UniProt: Q9UM07

Downloads

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