ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6biyB3 - ECOD Domain | ECOD

ECOD/Domains/e6biyB3

e6biyB3

UID: 002531664

PDB

Range: B:2-87
PDB: 6BIY chain B(all domains)
UniProt: P01911 (all domains)
Gene: HLA-DRB1

Molecule: HLA class II DR-beta (HLA-DR B)

3D Structure

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Related Domains

Browse other domains in MHC_II_beta →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMHC antigen-recognition domain(233)

HH-groupMHC antigen-recognition domain(233.1)

TT-groupMHC antigen-recognition domain(233.1.1)

FFamilyMHC_II_beta(233.1.1.2)

Ligands

in contact, ≤ 4 Å

2-[3-(2-Hydroxy-1,1-Dihydroxymethyl-Ethylamino)-Propylamino]-2-Hydroxymethyl-Propane-1,3-DiolB3P
drugDrugBank DB02676
N-AcetylglucosamineNAG
drug

Pfam Families

PF00969MHC_II_beta

Class II histocompatibility antigen, beta domain

ClanCL0343MHC

External Links

ECOD PDB View: 6BIY RCSB PDB: 6BIY PDBe: 6BIY UniProt: P01911

Downloads

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DrugBank DB00141

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.