ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6hioC2 - ECOD Domain | ECOD

ECOD/Domains/e6hioC2

e6hioC2

UID: 002532289

PDB

Range: C:9-205
PDB: 6HIO chain C(all domains)
UniProt: P23979 (all domains)
Gene: Htr3a

Molecule: 5-hydroxytryptamine receptor 3A

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
SerotoninSRO
drugDrugBank DB08839within 5 Å only

Shown in the structure viewer.

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 6HIO RCSB PDB: 6HIO PDBe: 6HIO UniProt: P23979

Downloads

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Drug annotations from DrugDomain.