ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6i08D1 - ECOD Domain | ECOD

ECOD/Domains/e6i08D1

e6i08D1

UID: 002532453

PDB

Range: D:5-183
PDB: 6I08 chain D(all domains)
UniProt: Q7NDN8 (all domains)
Gene: glvI

Molecule: Proton-gated ion channel

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

Diundecyl Phosphatidyl CholinePLC
drugDrugBank DB02777
Chloride ionCL
Sodium ionNA

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 6I08 RCSB PDB: 6I08 PDBe: 6I08 UniProt: Q7NDN8

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.