ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ocgA1 - ECOD Domain | ECOD

ECOD/Domains/e6ocgA1

e6ocgA1

UID: 002532790

PDB

Range: A:59-305
PDB: 6OCG chain A(all domains)
UniProt: Q7L8A9 (all domains)
Gene: VASH1

Molecule: Tubulinyl-Tyr carboxypeptidase 1

3D Structure

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Related Domains

Browse other domains in Vasohibin →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyVasohibin(219.1.1.53)

Ligands

in contact, ≤ 4 Å

N-[(3R)-4-ethoxy-3-hydroxy-4-oxobutanoyl]-L-tyrosineBJL
Chloride ionCL

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

PF14822Vasohibin

Vasohibin

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 6OCG RCSB PDB: 6OCG PDBe: 6OCG UniProt: Q7L8A9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.