ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6jzcA1 - ECOD Domain | ECOD

ECOD/Domains/e6jzcA1

e6jzcA1

UID: 002532838

PDB

Range: A:49-299
PDB: 6JZC chain A(all domains)
UniProt: Q8C5G2 (all domains)
Gene: Vash2

Molecule: Tubulinyl-Tyr carboxypeptidase 2

3D Structure

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Related Domains

Browse other domains in Vasohibin →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyVasohibin(219.1.1.53)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14822Vasohibin

Vasohibin

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 6JZC RCSB PDB: 6JZC PDBe: 6JZC UniProt: Q8C5G2

Downloads

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