ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6np0B1 - ECOD Domain | ECOD

ECOD/Domains/e6np0B1

e6np0B1

UID: 002532918

PDB

Range: B:206-332,B:409-462
PDB: 6NP0 chain B(all domains)
UniProt: P23979 (all domains)
Gene: Htr3a

Molecule: 5-hydroxytryptamine receptor 3A

3D Structure

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Related Domains

Browse other domains in Neur_chan_memb →

Classification

AArchitecturealpha bundles(a.7)

XX-groupNeurotransmitter-gated ion-channel transmembrane pore(5057)

HH-groupNeurotransmitter-gated ion-channel transmembrane pore(5057.1)

TT-groupNeurotransmitter-gated ion-channel transmembrane pore(5057.1.1)

FFamilyNeur_chan_memb(5057.1.1.1)

Ligands

in contact, ≤ 4 Å

GranisetronCWB
drugDrugBank DB00889
N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

Pfam Families

PF02932Neur_chan_memb

Neurotransmitter-gated ion-channel transmembrane region

ClanCL0975NLGIC_TM

External Links

ECOD PDB View: 6NP0 RCSB PDB: 6NP0 PDBe: 6NP0 UniProt: P23979

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.