ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6eg5A2 - ECOD Domain | ECOD

ECOD/Domains/e6eg5A2

e6eg5A2

UID: 002533115

PDB

Range: A:243-439
PDB: 6EG5 chain A(all domains)
UniProt: Q2XVP4 (all domains)
Gene: TUBA1B

Molecule: Tubulin alpha-1B chain

3D Structure

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Related Domains

Browse other domains in Tubulin_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupTubulin C-terminal domain-like(301.6)

TT-groupTubulin C-terminal domain-like(301.6.1)

FFamilyTubulin_C(301.6.1.1)

Ligands

in contact, ≤ 4 Å

4-(2-chloropyrido[2,3-d]pyrimidin-4-yl)-7-methoxy-3,4-dihydroquinoxalin-2(1H)-oneJ7S
within 5 Å only

+ 2 additives (Glycerin, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF03953Tubulin_C

Tubulin C-terminal domain

ClanCL0442Tubulin_C

External Links

ECOD PDB View: 6EG5 RCSB PDB: 6EG5 PDBe: 6EG5 UniProt: Q2XVP4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

2-(N-MORPHOLINO)-ETHANESULFONIC ACID

Shown in the structure viewer. Drug annotations from DrugDomain.