ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6ox2A1 - ECOD Domain | ECOD

ECOD/Domains/e6ox2A1

e6ox2A1

UID: 002533350

PDB

Range: A:335-501
PDB: 6OX2 chain A(all domains)
UniProt: Q86TU7 (all domains)
Gene: SETD3

Molecule: Histone-lysine N-methyltransferase setd3

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rubis-subs-bind →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupRuBisCo LSMT C-terminal, substrate-binding domain(630)

HH-groupRuBisCo LSMT C-terminal, substrate-binding domain(630.1)

TT-groupRuBisCo LSMT C-terminal, substrate-binding domain(630.1.1)

FFamilyRubis-subs-bind(630.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09273Rubis-subs-bind

Rubisco LSMT substrate-binding

External Links

ECOD PDB View: 6OX2 RCSB PDB: 6OX2 PDBe: 6OX2 UniProt: Q86TU7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure