ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ghvF1 - ECOD Domain | ECOD

ECOD/Domains/e6ghvF1

e6ghvF1

UID: 002534036

PDB

Range: F:253-384
PDB: 6GHV chain F(all domains)
UniProt: Q9NNX6 (all domains)
Gene: CD209

Molecule: CD209 antigen

3D Structure

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Related Domains

Browse other domains in Lectin_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupC-type lectin-like(209)

HH-groupC-type lectin-like(209.1)

TT-groupC-type lectin-like(209.1.1)

FFamilyLectin_C(209.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL
[1-[(2~{S},3~{S},4~{R},5~{S},6~{R})-2-[(1~{S},2~{S},4~{S},5~{S})-2-(2-chloroethyloxy)-4,5-bis[[4-(hydroxymethyl)phenyl]methylcarbamoyl]cyclohexyl]oxy-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]-1,2,3-triazol-4-yl]methylazaniumEZ8

Pfam Families

PF00059Lectin_C

Lectin C-type domain

ClanCL0056C_Lectin

External Links

ECOD PDB View: 6GHV RCSB PDB: 6GHV PDBe: 6GHV UniProt: Q9NNX6

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.