ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6icoB1 - ECOD Domain | ECOD

ECOD/Domains/e6icoB1

e6icoB1

UID: 002534599

PDB

Range: B:137-350
PDB: 6ICO chain B(all domains)
UniProt: H9N289 (all domains)
Gene: ndmA

Molecule: Methylxanthine N1-demethylase NdmA

3D Structure

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Related Domains

Browse other domains in VanA_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupBet v1-like(331.3)

TT-groupBet v1-like(331.3.1)

FFamilyVanA_C(331.3.1.19)

Ligands

in contact, ≤ 4 Å

TheophyllineTEP
drugDrugBank DB00277
COBALT (II) IONCO
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Vanillate O-demethylase oxygenase C-terminal domain

ClanCL0209Bet_v_1_like

External Links

ECOD PDB View: 6ICO RCSB PDB: 6ICO PDBe: 6ICO UniProt: H9N289

Downloads

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