ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6k9vA1 - ECOD Domain | ECOD

ECOD/Domains/e6k9vA1

e6k9vA1

UID: 002535081

PDB

Range: A:1-244
PDB: 6K9V chain A(all domains)
UniProt: P81947 (all domains)

Molecule: Tubulin alpha-1B chain

3D Structure

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Related Domains

Browse other domains in Tubulin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupTubulin nucleotide-binding domain-like(2003.1.6)

FFamilyTubulin(2003.1.6.1)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
(5-methoxy-1H-indol-2-yl)-phenyl-methanoneD3L
Magnesium ionMG

Pfam Families

PF00091Tubulin

Tubulin/FtsZ family, GTPase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6K9V RCSB PDB: 6K9V PDBe: 6K9V UniProt: P81947

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.