ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ozqB1 - ECOD Domain | ECOD

ECOD/Domains/e6ozqB1

e6ozqB1

UID: 002536505

PDB

Range: B:8-253
PDB: 6OZQ chain B(all domains)
UniProt: Q8C9A2 (all domains)
Gene: Endov

Molecule: Endonuclease V

3D Structure

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Related Domains

Browse other domains in Endonuclease_5 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyEndonuclease_5(2484.1.1.43)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
1,2-ETHANEDIOL

Pfam Families

PF04493Endonuclease_5

Endonuclease V

ClanCL0219RNase_H

External Links

ECOD PDB View: 6OZQ RCSB PDB: 6OZQ PDBe: 6OZQ UniProt: Q8C9A2

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.