ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ozrA1 - ECOD Domain | ECOD

ECOD/Domains/e6ozrA1

e6ozrA1

UID: 002536506

PDB

Range: A:7-249
PDB: 6OZR chain A(all domains)
UniProt: Q8C9A2 (all domains)
Gene: Endov

Molecule: Endonuclease V

3D Structure

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Related Domains

Browse other domains in Endonuclease_5 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyEndonuclease_5(2484.1.1.43)

Ligands

in contact, ≤ 4 Å

L-tartaric acidTLA
drugDrugBank DB09459
Potassium ionK
metal
Magnesium ionMG

Pfam Families

PF04493Endonuclease_5

Endonuclease V

ClanCL0219RNase_H

External Links

ECOD PDB View: 6OZR RCSB PDB: 6OZR PDBe: 6OZR UniProt: Q8C9A2

Downloads

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metal

+ 3 additives (Glycerin, Triethylene glycol, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
Triethylene glycolPGE
DrugBank DB02327
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.