ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ozsB1 - ECOD Domain | ECOD

ECOD/Domains/e6ozsB1

e6ozsB1

UID: 002536509

PDB

Range: B:8-251
PDB: 6OZS chain B(all domains)
UniProt: Q8C9A2 (all domains)
Gene: Endov

Molecule: Endonuclease V

3D Structure

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Related Domains

Browse other domains in Endonuclease_5 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyEndonuclease_5(2484.1.1.43)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Sodium ionNA
metal

+ 1 additive (Triethylene glycol)

Triethylene glycolPGE

Pfam Families

PF04493Endonuclease_5

Endonuclease V

ClanCL0219RNase_H

External Links

ECOD PDB View: 6OZS RCSB PDB: 6OZS PDBe: 6OZS UniProt: Q8C9A2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB02327

Shown in the structure viewer. Drug annotations from DrugDomain.