ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6p86B2 - ECOD Domain | ECOD

ECOD/Domains/e6p86B2

e6p86B2

UID: 002536880

PDB

Range: B:172-340
PDB: 6P86 chain B(all domains)
UniProt: P21645 (all domains)
Gene: lpxD

Molecule: UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase

3D Structure

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Related Domains

Browse other domains in Hexapep →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded left-handed beta-helix(208)

HH-groupTrimeric LpxA-like enzymes(208.1)

TT-groupTrimeric LpxA-like enzymes(208.1.1)

FFamilyHexapep(208.1.1.1)

Ligands

in contact, ≤ 4 Å

3-hydroxy-7,7-dimethyl-2-phenyl-4-(thiophen-2-yl)-2,6,7,8-tetrahydro-5H-pyrazolo[3,4-b]quinolin-5-oneO3V

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00132Hexapep

Bacterial transferase hexapeptide (six repeats)

ClanCL0536HEXAPEP

External Links

ECOD PDB View: 6P86 RCSB PDB: 6P86 PDBe: 6P86 UniProt: P21645

Downloads

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