ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6q39C1 - ECOD Domain | ECOD

ECOD/Domains/e6q39C1

e6q39C1

UID: 002537313

PDB

Range: C:24-329
PDB: 6Q39 chain C(all domains)
UniProt: P78540 (all domains)
Gene: ARG2

Molecule: Arginase-2, mitochondrial

3D Structure

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Related Domains

Browse other domains in Arginase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupArginase/deacetylase(2006.1.5)

FFamilyArginase(2006.1.5.1)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
3-[(3~{S},4~{R})-4-azanyl-4-carboxy-1-[[(2~{S})-piperidin-2-yl]methyl]pyrrolidin-3-yl]propyl-tris(oxidanyl)boranuideHDQ
MANGANESE (II) ION

Pfam Families

PF00491Arginase

Arginase family

ClanCL0302Arginase

External Links

ECOD PDB View: 6Q39 RCSB PDB: 6Q39 PDBe: 6Q39 UniProt: P78540

Downloads

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metal

BenzamidineBEN

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.