ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6qm3B1 - ECOD Domain | ECOD

ECOD/Domains/e6qm3B1

e6qm3B1

UID: 002537365

PDB

Range: B:212-477
PDB: 6QM3 chain B(all domains)
UniProt: O88998 (all domains)
Gene: Olfm1

Molecule: Noelin

3D Structure

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Related Domains

Browse other domains in OLF →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyOLF(5.1.3.9)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Calcium ionCA
metal
Sodium ion

Pfam Families

Olfactomedin-like domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 6QM3 RCSB PDB: 6QM3 PDBe: 6QM3 UniProt: O88998

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.