ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6r1bD1 - ECOD Domain | ECOD

ECOD/Domains/e6r1bD1

e6r1bD1

UID: 002537922

PDB

Range: D:153-305
PDB: 6R1B chain D(all domains)
UniProt: P71619 (all domains)
Gene: ugpB

Molecule: Putative Sn-glycerol-3-phosphate-binding lipoprotein UgpB

3D Structure

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Related Domains

Browse other domains in SBP_bac_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_1(7523.1.1.8)

Ligands

in contact, ≤ 4 Å

Choline alfoscerateCH5
drugDrugBank DB04660

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01547SBP_bac_1

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 6R1B RCSB PDB: 6R1B PDBe: 6R1B UniProt: P71619

Downloads

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