ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6r2cB1 - ECOD Domain | ECOD

ECOD/Domains/e6r2cB1

e6r2cB1

UID: 002537983

PDB

Range: B:820-1090
PDB: 6R2C chain B(all domains)
UniProt: A0R2B1 (all domains)
Gene: kgd

Molecule: Multifunctional 2-oxoglutarate metabolism enzyme

3D Structure

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Related Domains

Browse other domains in Transket_pyr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTransket_pyr(7574.1.1.8)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
4-[ethoxy(oxidanyl)phosphoryl]-4-oxidanylidene-butanoic acidJQ5
Thiamine diphosphateTPP

Pfam Families

PF02779Transket_pyr

Transketolase, pyrimidine binding domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 6R2C RCSB PDB: 6R2C PDBe: 6R2C UniProt: A0R2B1

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.