ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6r4vB1 - ECOD Domain | ECOD

ECOD/Domains/e6r4vB1

e6r4vB1

UID: 002538079

PDB

Range: B:4-298
PDB: 6R4V chain B(all domains)
UniProt: O95749 (all domains)
Gene: GGPS1

Molecule: Geranylgeranyl pyrophosphate synthase

3D Structure

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Related Domains

Browse other domains in polyprenyl_synt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilypolyprenyl_synt(141.1.1.1)

Ligands

in contact, ≤ 4 Å

IbandronateBFQ
drugDrugBank DB00710
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00348polyprenyl_synt

Polyprenyl synthetase

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 6R4V RCSB PDB: 6R4V PDBe: 6R4V UniProt: O95749

Downloads

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