ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rn6F1 - ECOD Domain | ECOD

ECOD/Domains/e6rn6F1

e6rn6F1

UID: 002538411

PDB

Range: F:372-439
PDB: 6RN6 chain F(all domains)
UniProt: P53634 (all domains)
Gene: CTSC

Molecule: Dipeptidyl peptidase 1

3D Structure

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Related Domains

Browse other domains in Peptidase_C1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C1(219.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
(2~{S},4~{R})-~{N}-[(2~{S})-1-azanyl-3-(4-phenylphenyl)propan-2-yl]-4-oxidanyl-pyrrolidine-2-carboxamideK9Q

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00112Peptidase_C1

Papain family cysteine protease

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 6RN6 RCSB PDB: 6RN6 PDBe: 6RN6 UniProt: P53634

Downloads

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