ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rk1A1 - ECOD Domain | ECOD

ECOD/Domains/e6rk1A1

e6rk1A1

UID: 002539033

RepresentativePDB

Range: A:199-244
PDB: 6RK1 chain A(all domains)
UniProt: Q9QZQ5 (all domains)
Gene: Ccn3

Molecule: CCN family member 3

3D Structure

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Related Domains

Browse other domains in TSP1_CCN →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTSP-1 type 1 repeat(922)

HH-groupTSP-1 type 1 repeat(922.1)

TT-groupTSP-1 type 1 repeat(922.1.1)

FFamilyTSP1_CCN(922.1.1.3)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Sodium ionNA
metal

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

PF19035TSP1_CCN

CCN3 Nov like TSP1 domain

ClanCL0692TSP1

External Links

ECOD PDB View: 6RK1 RCSB PDB: 6RK1 PDBe: 6RK1 UniProt: Q9QZQ5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.