ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4g6zA2 - ECOD Domain | ECOD

ECOD/Domains/e4g6zA2

e4g6zA2

UID: 002539134

PDB

Range: A:3-102,A:122-236
PDB: 4G6Z chain A(all domains)
UniProt: Q2SX36 (all domains)
Gene: gltX

Molecule: Glutamate-tRNA ligase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1c →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1c(2005.1.1.5)

Ligands

in contact, ≤ 4 Å

Glutamic acidGLU
drugDrugBank DB00142

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer.

Pfam Families

PF00749tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

ClanCL0039HUP

External Links

ECOD PDB View: 4G6Z RCSB PDB: 4G6Z PDBe: 4G6Z UniProt: Q2SX36

Downloads

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Drug annotations from DrugDomain.