ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6hmjC1 - ECOD Domain | ECOD

ECOD/Domains/e6hmjC1

e6hmjC1

UID: 002539977

PDB

Range: C:207-373
PDB: 6HMJ chain C(all domains)
UniProt: C8XJT7 (all domains)
Gene: Namu_4361

Molecule: Putative PAS/PAC sensor protein

3D Structure

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Related Domains

Browse other domains in PAS_9 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilyPAS_9(223.1.1.25)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PAS domain

ClanCL0183PAS_Fold

External Links

ECOD PDB View: 6HMJ RCSB PDB: 6HMJ PDBe: 6HMJ UniProt: C8XJT7

Downloads

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