ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6r4nB1 - ECOD Domain | ECOD

ECOD/Domains/e6r4nB1

e6r4nB1

UID: 002540293

PDB

Range: B:33-173
PDB: 6R4N chain B(all domains)
UniProt: Q12408 (all domains)
Gene: NPC2

Molecule: Phosphatidylglycerol/phosphatidylinositol transfer protein

3D Structure

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Related Domains

Browse other domains in E1_DerP2_DerF2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyE1_DerP2_DerF2(11.1.1.37)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF02221E1_DerP2_DerF2

ML domain

ClanCL0532LIG

External Links

ECOD PDB View: 6R4N RCSB PDB: 6R4N PDBe: 6R4N UniProt: Q12408

Downloads

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Drug annotations from DrugDomain.