ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ub9E1 - ECOD Domain | ECOD

ECOD/Domains/e6ub9E1

e6ub9E1

UID: 002540560

PDB

Range: E:9-266
PDB: 6UB9 chain E(all domains)
UniProt: P9WFY1 (all domains)
Gene: trpA

Molecule: Tryptophan synthase alpha chain

3D Structure

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Related Domains

Browse other domains in Trp_syntA →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyTrp_syntA(2002.1.1.15)

Ligands

in contact, ≤ 4 Å

Malonic acidMLA
drugDrugBank DB02175
(2R,3S,4R)-3-(4'-chloro-2',6'-difluoro[1,1'-biphenyl]-4-yl)-4-(fluoromethyl)azetidine-2-carbonitrileH9V

+ 1 additive (Formic acid)

Pfam Families

PF00290Trp_syntA

Tryptophan synthase alpha chain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6UB9 RCSB PDB: 6UB9 PDBe: 6UB9 UniProt: P9WFY1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Formic acid

DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.