ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6udaI2 - ECOD Domain | ECOD

ECOD/Domains/e6udaI2

e6udaI2

UID: 002541365

PDB

Range: I:256-471
PDB: 6UDA chain I(all domains)
UniProt: M4M0W3 (all domains)
Gene: env

Molecule: CH505.N279K.G458Y.SOSIP.664 gp120

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein L31e-like(259)

HH-groupRibosomal protein L31e/gp120 outer domain(259.1)

TT-groupRibosomal protein L31e/gp120 outer domain(259.1.1)

FFamilyGP120(259.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 6UDA RCSB PDB: 6UDA PDBe: 6UDA UniProt: M4M0W3

Downloads

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