ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6oczN1 - ECOD Domain | ECOD

ECOD/Domains/e6oczN1

e6oczN1

UID: 002542872

PDB

Range: N:1-223
PDB: 6OCZ chain N(all domains)
UniProt: P9WHT9 (all domains)
Gene: prcB

Molecule: Proteasome subunit beta

3D Structure

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Related Domains

Browse other domains in Proteasome →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome(210.1.1.1)

Ligands

in contact, ≤ 4 Å

N-{(2S)-1-({(2S)-1-[(2,4-difluorobenzyl)amino]-1-oxopropan-2-yl}amino)-1,4-dioxo-4-[(2R)-2-phenylpyrrolidin-1-yl]butan-2-yl}-5-methyl-1,2-oxazole-3-carboxamide (non-preferred name)M6Y

+ 2 additives (Citric acid, Dimethylformamide)

Citric acidCIT
DrugBank DB04272

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

External Links

ECOD PDB View: 6OCZ RCSB PDB: 6OCZ PDBe: 6OCZ UniProt: P9WHT9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DimethylformamideDMF

Shown in the structure viewer. Drug annotations from DrugDomain.