ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6omsA1 - ECOD Domain | ECOD

ECOD/Domains/e6omsA1

e6omsA1

UID: 002542908

PDB

Range: A:418-472,A:494-525,A:570-575
PDB: 6OMS chain A(all domains)
UniProt: Q9LYU4 (all domains)
Gene: GH3.12

Molecule: 4-substituted benzoates-glutamate ligase GH3.12

3D Structure

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Related Domains

Browse other domains in GH3_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5)

TT-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5.1)

FFamilyGH3_C(327.5.1.4)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateAMP
drugDrugBank DB00131

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

GH3 family C-terminal domain

External Links

ECOD PDB View: 6OMS RCSB PDB: 6OMS PDBe: 6OMS UniProt: Q9LYU4

Downloads

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