ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rymA1 - ECOD Domain | ECOD

ECOD/Domains/e6rymA1

e6rymA1

UID: 002542955

PDB

Range: A:230-351
PDB: 6RYM chain A(all domains)
UniProt: P23805 (all domains)
Gene: CGN1

Molecule: Conglutinin

3D Structure

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Related Domains

Browse other domains in Lectin_C,Surfac_D-trimer →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupC-type lectin-like(209)

HH-groupC-type lectin-like(209.1)

TT-groupC-type lectin-like(209.1.1)

FFamilyLectin_C,Surfac_D-trimer(209.1.1.3)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
N-acetyl-alpha-D-glucosamineNDG
drugDrugBank DB03740

Pfam Families

PF00059Lectin_C

Lectin C-type domain

ClanCL0056C_Lectin

PF09006Surfac_D-trimer

Lung surfactant protein D coiled-coil trimerisation

External Links

ECOD PDB View: 6RYM RCSB PDB: 6RYM PDBe: 6RYM UniProt: P23805

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Calcium ionCA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.