ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6s6dB2 - ECOD Domain | ECOD

ECOD/Domains/e6s6dB2

e6s6dB2

UID: 002545087

PDB

Range: B:4-181
PDB: 6S6D chain B(all domains)
UniProt: Q7L523 (all domains)
Gene: RRAGA

Molecule: Ras-related GTP-binding protein A

3D Structure

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Related Domains

Browse other domains in Gtr1_RagA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyGtr1_RagA(2004.1.1.119)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
pentane-1,5-diol9JE
Magnesium ionMG

Pfam Families

PF04670Gtr1_RagA

Gtr1/RagA G protein conserved region

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6S6D RCSB PDB: 6S6D PDBe: 6S6D UniProt: Q7L523

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.