ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6kadx1 - ECOD Domain | ECOD

ECOD/Domains/e6kadx1

e6kadx1

UID: 002545291

PDB

Range: x:64-97
PDB: 6KAD chain x(all domains)
UniProt: A8I846 (all domains)
Gene: CHLRE_02g082750v5

Molecule: 4.1 kDa photosystem II subunit

3D Structure

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Related Domains

Browse other domains in PsbX →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II PsbX protein(3493)

HH-groupPhotosystem II PsbX protein(3493.1)

TT-groupPhotosystem II PsbX protein(3493.1.1)

FFamilyPsbX(3493.1.1.1)

Ligands

in contact, ≤ 4 Å

Chlorophyll ACLA
drugDrugBank DB02133
Beta caroteneBCR
drugDrugBank DB06755within 5 Å only

Pfam Families

Photosystem II reaction centre X protein (PsbX)

External Links

ECOD PDB View: 6KAD RCSB PDB: 6KAD PDBe: 6KAD UniProt: A8I846

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLSQD

1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.