ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6kaff1 - ECOD Domain | ECOD

ECOD/Domains/e6kaff1

e6kaff1

UID: 002545300

PDB

Range: f:15-44
PDB: 6KAF chain f(all domains)
UniProt: Q08363 (all domains)
Gene: psbF

Molecule: Cytochrome b559 subunit beta

3D Structure

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Related Domains

Browse other domains in Cytochrom_B559 →

Classification

AArchitectureextended segments(a.20)

XX-groupCytochrome b559 subunits(5036)

HH-groupCytochrome b559 subunits(5036.1)

TT-groupCytochrome b559 subunits(5036.1.1)

FFamilyCytochrom_B559(5036.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
FerrohemeHEM
drugDrugBank DB18267
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE

Pfam Families

PF00283Cytochrom_B559

Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits

External Links

ECOD PDB View: 6KAF RCSB PDB: 6KAF PDBe: 6KAF UniProt: Q08363

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.