ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6kkuB1 - ECOD Domain | ECOD

ECOD/Domains/e6kkuB1

e6kkuB1

UID: 002545359

PDB

Range: B:116-652
PDB: 6KKU chain B(all domains)
UniProt: Q9UP95 (all domains)
Gene: SLC12A4

Molecule: Solute carrier family 12 member 4

3D Structure

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Related Domains

Browse other domains in AA_permease →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium:neurotransmitter symporter family (SNF)-like(5051)

HH-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1)

TT-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1.1)

FFamilyAA_permease(5051.1.1.2)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
2-[2-[(1~{S},2~{S},4~{S},5'~{R},6~{R},7~{S},8~{R},9~{S},12~{S},13~{R},16~{S})-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icos-18-ene-6,2'-oxane]-16-yl]oxyethyl]propane-1,3-diolDU0

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00324AA_permease

Amino acid permease

ClanCL0062APC

External Links

ECOD PDB View: 6KKU RCSB PDB: 6KKU PDBe: 6KKU UniProt: Q9UP95

Downloads

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