ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6pz4A2 - ECOD Domain | ECOD

ECOD/Domains/e6pz4A2

e6pz4A2

UID: 002546555

PDB

Range: A:60-244
PDB: 6PZ4 chain A(all domains)
UniProt: P56817 (all domains)
Gene: BACE1

Molecule: Beta-secretase 1

3D Structure

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Related Domains

Browse other domains in Asp →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyAsp(1.1.1.1)

Ligands

in contact, ≤ 4 Å

Iodide ionIOD
N-{3-[(1S,5S,6S)-3-amino-1-(methoxymethyl)-5-methyl-2-thia-4-azabicyclo[4.1.0]hept-3-en-5-yl]-4,5-difluorophenyl}-5-[(prop-2-yn-1-yl)oxy]pyrazine-2-carboxamideP6J

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

Eukaryotic aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 6PZ4 RCSB PDB: 6PZ4 PDBe: 6PZ4 UniProt: P56817

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.