ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6qiiG2 - ECOD Domain | ECOD

ECOD/Domains/e6qiiG2

e6qiiG2

UID: 002547694

PDB

Range: G:18-195
PDB: 6QII chain G(all domains)
UniProt: A0A0E3LP72 (all domains)
Gene: MSBRM_3018

Molecule: Coenzyme F420 hydrogenase subunit gamma

3D Structure

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Related Domains

Browse other domains in Oxidored_q6 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupCheY-like(2007.1.3)

FFamilyOxidored_q6(2007.1.3.3)

Ligands

in contact, ≤ 4 Å

Tris-Hydroxymethyl-Methyl-Ammonium144
drugDrugBank DB03570
FE2/S2 (INORGANIC) CLUSTERFES
Iron/sulfur clusterSF4

Pfam Families

PF01058Oxidored_q6

NADH ubiquinone oxidoreductase, 20 Kd subunit

ClanCL0304CheY

External Links

ECOD PDB View: 6QII RCSB PDB: 6QII PDBe: 6QII UniProt: A0A0E3LP72

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

XenonXE

FE (III) IONFE

metalwithin 5 Å only

+ 1 additive ((R,R)-2,3-BUTANEDIOL)

(R,R)-2,3-BUTANEDIOLBU3

Shown in the structure viewer. Drug annotations from DrugDomain.