ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6kfnA1 - ECOD Domain | ECOD

ECOD/Domains/e6kfnA1

e6kfnA1

UID: 002547953

PDB

Range: A:36-333
PDB: 6KFN chain A(all domains)

Molecule: alginate lyase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pel9A-like_beta_helix →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyPel9A-like_beta_helix(207.2.1.33)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 1 additive (Imidazole)

ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22842Pel9A-like_beta_helix

Pel9A-like, right handed beta helix region

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 6KFN RCSB PDB: 6KFN PDBe: 6KFN

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure