ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6japA2 - ECOD Domain | ECOD

ECOD/Domains/e6japA2

e6japA2

UID: 002548834

PDB

Range: A:3-118,A:285-406
PDB: 6JAP chain A(all domains)
UniProt: Q5SLD7 (all domains)
Gene: TTHA0356

Molecule: ABC transporter, periplasmic substrate-binding protein

3D Structure

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Related Domains

Browse other domains in this classification →

Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Citric acid, Glycerin, 1,2-ETHANEDIOL)

Citric acidCIT
DrugBank DB04272
GlycerinGOL
DrugBank DB09462
1,2-ETHANEDIOL

External Links

ECOD PDB View: 6JAP RCSB PDB: 6JAP PDBe: 6JAP UniProt: Q5SLD7

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.