ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6pbmB1 - ECOD Domain | ECOD

ECOD/Domains/e6pbmB1

e6pbmB1

UID: 002548932

PDB

Range: B:203-431
PDB: 6PBM chain B(all domains)
UniProt: Q9HUX5 (all domains)
Gene: cntM

Molecule: Pseudopaline Dehydrogenase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Staph_opine_DH →

Classification

AArchitecturealpha arrays(a.6)

XX-group6-phosphogluconate dehydrogenase C-terminal domain-like(129)

HH-group6-phosphogluconate dehydrogenase C-terminal domain-like(129.1)

TT-group6-phosphogluconate dehydrogenase C-terminal domain-like(129.1.1)

FFamilyStaph_opine_DH(129.1.1.13)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10100Staph_opine_DH

Staphylopine dehydrogenase

External Links

ECOD PDB View: 6PBM RCSB PDB: 6PBM PDBe: 6PBM UniProt: Q9HUX5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure