ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6pbmB2 - ECOD Domain | ECOD

ECOD/Domains/e6pbmB2

e6pbmB2

UID: 002548933

PDB

Range: B:7-202
PDB: 6PBM chain B(all domains)
UniProt: Q9HUX5 (all domains)
Gene: cntM

Molecule: Pseudopaline Dehydrogenase

3D Structure

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Related Domains

Browse other domains in Staph_opine_DH →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyStaph_opine_DH(2003.1.1.64)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10100Staph_opine_DH

Staphylopine dehydrogenase

External Links

ECOD PDB View: 6PBM RCSB PDB: 6PBM PDBe: 6PBM UniProt: Q9HUX5

Downloads

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